1. So we can confirm that my vqmod is working correctly now, even though I am getting the index permissions message? I have been pulling my hair out all day thinking I have buggered everything up

2. I am still very confused with the "editing the module" and editing the "script" to make changes, on an older website I had, when I tried to change some of the CSS script, it clashed with the changes I made on the module and I had a few problems - ended up scrapping the website! So lets say I changed the header colour to red on the module, then changed it to blue on the css file - what would happen?