Unfortunately it can actually be quite difficult to find all bits of malicious code because they are designed to be hidden.
Probably your best bet is to find a developer who is experienced in this. They should be able to compare your website files to a fresh copy of the exact same version of OpenCart with a look like: http://meldmerge.org/ which can help them find it.
They can do the same thing with a fresh copy of your theme.
Once those things are removed, you have to submit a request through Webmaster Tools to get the virus warning taken off your site.
Probably your best bet is to find a developer who is experienced in this. They should be able to compare your website files to a fresh copy of the exact same version of OpenCart with a look like: http://meldmerge.org/ which can help them find it.
They can do the same thing with a fresh copy of your theme.
Once those things are removed, you have to submit a request through Webmaster Tools to get the virus warning taken off your site.
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